Cyclic Peptide Sequencing Problem: Difference between revisions
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Revision as of 14:47, 15 February 2023
Description
Given an experimental $MS^3$ spectrum $S$, find a cyclic peptide $P$ maximizing the number of shared masses between $S$ and the theoretical spectrum of $P$.
Parameters
No parameters found.
Table of Algorithms
| Name | Year | Time | Space | Approximation Factor | Model | Reference |
|---|---|---|---|---|---|---|
| Brute force | 1987 | ${2}^{O(n)}$ | $O(n)$? | Exact | Deterministic | |
| Branch and bound | 1993 | ${2}^{O(n)}$ | $O({2}^{O(n)})$? | Exact | Deterministic |
Time Complexity Graph
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Space Complexity Graph
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Time-Space Tradeoff
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