The Frequent Words Problem: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
Line 34: | Line 34: | ||
[[File:The Frequent Words Problem - Space.png|1000px]] | [[File:The Frequent Words Problem - Space.png|1000px]] | ||
== | == Time-Space Tradeoff == | ||
[[File:The Frequent Words Problem - Pareto Frontier.png|1000px]] | [[File:The Frequent Words Problem - Pareto Frontier.png|1000px]] |
Revision as of 14:48, 15 February 2023
Description
Given a string of length $n$ and in input integer $k$, determine the most frequent $k$-mers in the string, i.e. the most frequent words of length $k$.
Parameters
n: length of string
k: length of words
sigma: size of alphabet
Table of Algorithms
Name | Year | Time | Space | Approximation Factor | Model | Reference |
---|---|---|---|---|---|---|
Naive solution | 1940 | $O(n)$ | $O(max(n, sigma^k)$) auxiliary | Exact | Deterministic | |
Rabin Karp | 1987 | $O(n)$ | $O(max(n, sigma^k)$) auxiliary? | Exact | Deterministic |
Time Complexity Graph
Error creating thumbnail: Unable to save thumbnail to destination
Space Complexity Graph
Error creating thumbnail: Unable to save thumbnail to destination
Time-Space Tradeoff
Error creating thumbnail: Unable to save thumbnail to destination
References/Citation
http://bioinformaticsalgorithms.com/data/debugdatasets/replication/FrequentWordsProblem.pdf