Roth AlignACE (Motif Search Motif Search)
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Time Complexity
$O(nm)$
Space Complexity
$O(n + m)$ words
(derived: essentially just modified Gibbs sampling)
Description
Approximate?
Approximate
Approximation Factor:
Randomized?
No, deterministic
Model of Computation
Word RAM
Year
1998
Reference
https://www-ncbi-nlm-nih-gov.ezproxy.canberra.edu.au/pubmed/9788350