Sequence Alignment
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Problem Description
a sequence alignment is a way of arranging the sequences of DNA; RNA;
or protein to identify regions of similarity that may be a consequence of functional; structural; or evolutionary relationships between the sequences.
Bounds Chart
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Step Chart
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Improvement Table
| Complexity Classes | Algorithm Paper Links | Lower Bounds Paper Links |
|---|---|---|
| Exp/Factorial | ||
| Polynomial > 3 | ||
| Cubic | ||
| Quadratic | ||
| nlogn | ||
| Linear | ||
| logn |